STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0215Cysteine desulfurase activator complex subunit SufB. (481 aa)    
Predicted Functional Partners:
ZPR_0213
FeS assembly ATPase SufC.
 
 0.999
ZPR_0211
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.992
ZPR_0208
Conserved hypothetical protein.
   
 0.966
ZPR_0212
FeS assembly protein SufD.
   
0.925
ZPR_0344
Cysteine desulfurase-like protein.
 
 0.904
ZPR_0209
Protein containing fe-S metabolism associated domain.
 
 
 0.884
ZPR_0217
HesB/IscA family iron-sulfur cluster assembly scaffold protein; Belongs to the HesB/IscA family.
  
 
 0.851
ZPR_0214
Conserved hypothetical protein.
       0.759
ZPR_0393
Aminotransferase, class V.
 
 0.720
ZPR_3672
class-V aminotransferase.
  
 
 0.661
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.