STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0382TonB-dependent receptor. (1165 aa)    
Predicted Functional Partners:
ZPR_0383
Conserved hypothetical protein.
     0.946
ZPR_0384
Thioredoxin-like protein.
 
     0.850
ZPR_4661
RagB/SusD domain-containing protein.
 
     0.743
ZPR_0385
Protein containing alpha/beta hydrolase fold.
 
     0.717
ZPR_2950
Conserved hypothetical protein.
  
     0.679
ZPR_3554
RagB/SusD domain-containing protein.
  
     0.668
ZPR_0381
anti-FecI sigma factor, FecR.
 
    0.662
ZPR_3507
Putative outer membrane protein probably involved in nutrient binding.
  
     0.649
ZPR_0387
Peptidase M16 domain-containing protein; Belongs to the peptidase M16 family.
 
     0.640
ZPR_4663
Metalloprotease.
  
     0.619
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.