Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_0485Saccharopine dehydrogenase. (457 aa)    
Predicted Functional Partners:
ZPR_3542
Lysine 2-oxoglutarate reductase.
     0.977
ZPR_0484
Transcription regulator AsnC.
       0.669
ZPR_0486
Membrane protein.
       0.588
folE
GTP cyclohydrolase I.
   
   0.533
folE-2
GTP cyclohydrolase I.
   
   0.533
ZPR_3076
Conserved hypothetical protein.
  
     0.483
nbaC
Putative 3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.
  
     0.479
ZPR_0192
Tryptophan 2,3-dioxygenase.
  
     0.475
kmo
Kynurenine-3-monooxygenase-like protein; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
  
   
 0.475
ZPR_4151
Arginase; Belongs to the arginase family.
 
   
 0.466
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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