STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0593TonB family protein. (240 aa)    
Predicted Functional Partners:
ZPR_0592
Membrane protein.
 
     0.818
ZPR_0640
TPR repeat-containing protein.
  
     0.774
ZPR_2310
Conserved hypothetical protein.
  
     0.772
ZPR_4543
Biopolymer transport protein ExbD/TolR.
  
     0.772
ZPR_4542
Biopolymer transport protein ExbD/TolR.
  
     0.769
ZPR_0038
Conserved hypothetical protein.
  
     0.768
ZPR_3159
Peptidase M56.
 
     0.727
ZPR_3932
Conserved hypothetical protein.
  
     0.726
ZPR_3667
TonB protein.
 
     0.721
ZPR_4545
ExbB-like MotA/TolQ/ExbB family biopolymer transport protein.
  
     0.707
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.