STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0617OmpH family outer membrane protein. (241 aa)    
Predicted Functional Partners:
ZPR_0618
Surface antigen D15 family outer membrane protein.
 
  
 0.879
ZPR_0620
Conserved hypothetical protein.
 
 
 
 0.848
ZPR_0616
OmpH family outer membrane protein.
 
    
0.777
ZPR_3926
Conserved hypothetical protein.
  
    0.769
ZPR_0935
Conserved hypothetical protein.
 
     0.762
ZPR_0590
Conserved hypothetical protein.
  
     0.759
ZPR_3244
Conserved hypothetical protein.
  
     0.753
ZPR_0523
Membrane protein.
  
     0.717
ZPR_2362
Two-component response transcriptional regulator.
  
     0.715
ZPR_4450
Two-component system sensor histidine kinase.
  
     0.699
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.