Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ZPR_0618Surface antigen D15 family outer membrane protein. (877 aa)    
Predicted Functional Partners:
ZPR_3247
Nuclear transition protein.
 
 
 0.975
ZPR_0619
Undecaprenyl-pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
    0.967
ZPR_0639
Conserved hypothetical protein.
 
 
 
 0.963
ZPR_0616
OmpH family outer membrane protein.
 
  
 0.898
ZPR_0617
OmpH family outer membrane protein.
 
  
 0.892
ZPR_2020
FKBP-type peptidyl-prolyl cis-trans isomerase.
   
 
 0.887
ZPR_0620
Conserved hypothetical protein.
 
 
 
 0.883
ZPR_0868
PpiC-type peptidyl-prolyl cis-trans isomerase.
 
 
 0.831
lpxC
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
  
 0.831
ZPR_4691
LolC-like FtsX family membrane protein.
 
   
 0.777
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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