Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ZPR_0673AraC family transcription regulator. (196 aa)    
Predicted Functional Partners:
ZPR_1279
Bacterial regulatory helix-turn-helix protein.
  
     0.762
ZPR_0531
AraC family transcription regulator.
  
     0.743
ZPR_2507
Transcriptional regulator.
  
     0.728
ZPR_4187
AraC family transcription regulator.
  
     0.727
ZPR_2634
AraC family transcriptional regulator.
  
     0.724
ZPR_1510
Putative AraC-family regulatory protein.
  
   0.719
ZPR_3447
AraC family transcription regulator.
  
     0.719
ZPR_1971
AraC family transcription regulator.
  
     0.709
ZPR_3071
Helix-turn-helix domain-containing protein.
  
     0.696
ZPR_2138
Activator protein MtlR.
  
   0.694
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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