STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0691Hypothetical protein. (443 aa)    
Predicted Functional Partners:
ZPR_0690
tonB-dependent Receptor Plug domain protein.
 
 
   0.922
ZPR_3188
tonB-dependent Receptor Plug domain protein.
  
 
   0.737
ZPR_1629
tonB-dependent Receptor Plug domain protein.
  
 
   0.734
ZPR_0681
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.726
ZPR_1273
Integral membrane protein DUF6.
  
     0.628
ZPR_3073
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.615
ZPR_2898
Putative outer membrane protein.
  
 
   0.608
ZPR_0443
tonB-dependent Receptor Plug domain protein.
  
 
   0.597
ZPR_3555
Protein containing tonB-dependent Receptor Plug Domain.
  
     0.577
ZPR_3508
TonB-dependent outer membrane receptor.
 
     0.575
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.