STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0752Conserved hypothetical protein. (344 aa)    
Predicted Functional Partners:
ZPR_0753
Family 10 glycosyl hydrolase.
 
     0.938
ZPR_0750
tonB dependent receptor.
 
     0.924
ZPR_0751
Conserved hypothetical protein.
 
     0.923
ZPR_0749
Conserved hypothetical protein.
 
     0.868
ZPR_0748
tonB-dependent Receptor Plug domain protein.
 
     0.850
ZPR_0755
Histidine kinase.
 
     0.729
ZPR_4381
Conserved hypothetical protein.
  
     0.633
ZPR_1029
Glycoside hydrolase.
  
     0.619
ZPR_0754
Family 10 glycosyl hydrolase.
 
     0.604
ZPR_1033
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 43 family.
 
     0.598
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.