Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glgBGlycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (635 aa)    
Predicted Functional Partners:
ZPR_3846
Glycogen synthase.
 
 0.991
ZPR_4518
Glycogen synthase-like protein.
 
 
 0.990
ZPR_2815
Alpha amylase.
 
 
 0.951
ZPR_2971
1,4-alpha-glucan branching enzyme.
  
  
 
0.926
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 0.907
ZPR_2817
Alpha-glucosidase SusB.
    
  0.900
ZPR_2825
Alpha-amylase precursor, GH13 family protein.
    
  0.900
ZPR_1563
Six-hairpin glycosidase-like protein.
  
 
 0.800
ZPR_0763
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.690
ZPR_2459
Trehalose 6-phosphate synthase.
  
 
 0.601
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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