Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ZPR_0794Conserved hypothetical protein. (108 aa)    
Predicted Functional Partners:
ZPR_0795
1-aminocyclopropane-1-carboxylate deaminase-like protein.
       0.720
ZPR_0796
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase family protein.
       0.719
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
       0.706
ZPR_0626
Outer membrane protein.
  
     0.538
ZPR_0792
Conserved hypothetical protein.
 
     0.531
ZPR_0798
Hypothetical protein.
       0.518
ZPR_2133
Uncharacterized conserved protein.
  
     0.518
ZPR_2424
Membrane protein.
  
     0.494
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
       0.489
ZPR_1858
Membrane protein.
  
     0.484
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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