STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0811Conserved hypothetical protein. (129 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
     
 0.827
ZPR_2045
Membrane protein.
  
     0.771
ZPR_3044
Conserved hypothetical protein.
  
     0.771
ZPR_4209
Protein containing mevalonate and galactokinase signatures.
  
     0.762
ZPR_2357
Conserved hypothetical protein.
  
     0.749
ZPR_0464
Acyltransferase family protein.
  
     0.747
ZPR_3814
Secreted protein.
  
     0.738
ZPR_0807
Conserved hypothetical protein.
  
     0.736
ZPR_4156
Protein containing tetratricopeptide repeat.
  
     0.727
ZPR_4147
Gliding motility protein GldO.
  
     0.724
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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