STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0855Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (367 aa)    
Predicted Functional Partners:
ZPR_3938
Glutamate synthase (NADPH) large subunit.
  
 
 0.986
ZPR_2696
2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta.
  
 
 0.970
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
   
 0.914
ZPR_1637
Aminotransferase, class IV superfamily.
  
 
 0.912
ZPR_2522
Branched-chain-amino-acid aminotransferase.
  
 
 0.912
ZPR_3127
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.912
ZPR_1694
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.910
ZPR_1730
2-oxoacid dehydrogenase E1 component subunits alpha and beta.
  
  
 0.712
ZPR_4028
Glutathione reductase.
  
  
 0.645
ZPR_4602
Glutathione reductase.
  
  
 0.645
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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