Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ZPR_0874Gamma-carotene hydroxylase. (151 aa)    
Predicted Functional Partners:
ZPR_0873
Lycopene cyclase.
 
  
 0.986
ZPR_0875
Phytoene synthase.
 
 
 0.978
ZPR_0876
Phytoene dehydrogenase.
 
   
 0.964
ZPR_0877
MerR family transcriptional regulator.
 
     0.873
ZPR_1174
Isopentenyl-diphosphate delta-isomerase.
  
  
 0.507
ZPR_2863
Permease.
 
     0.473
kmo
Kynurenine-3-monooxygenase-like protein; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 
 0.464
ZPR_0878
Conserved hypothetical protein.
       0.457
ZPR_2315
Conserved hypothetical protein.
 
     0.425
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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