STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0875Phytoene synthase. (279 aa)    
Predicted Functional Partners:
ZPR_0876
Phytoene dehydrogenase.
 
 0.999
ZPR_0874
Gamma-carotene hydroxylase.
 
 
 0.983
ZPR_0877
MerR family transcriptional regulator.
 
  
 0.932
ZPR_3514
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.920
ZPR_4554
Isoprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.920
ZPR_0873
Lycopene cyclase.
 
  
 0.857
ZPR_0619
Undecaprenyl-pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.833
ZPR_3841
Male sterility protein.
 
  
 0.764
ZPR_0373
Phytoene dehydrogenase.
  
  
 0.730
ZPR_1174
Isopentenyl-diphosphate delta-isomerase.
 
  
 0.680
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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