STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0880Restriction modification system DNA specificity subunit. (440 aa)    
Predicted Functional Partners:
ZPR_0879
Type I restriction-modification system, M subunit.
 
 0.996
ZPR_0882
Type III restriction enzyme, res subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.932
ZPR_4122
Putative DNA methylase HsdM.
 
 
 0.859
ZPR_3435
Type I restriction-modification system methyltransferase subunit like protein.
 
 0.846
ZPR_4675
Type I restriction-modification system DNA methylase.
 
 0.843
ZPR_4127
Putative type I restriction enzyme HsdR.
 
  
 0.670
ZPR_3067
Restriction endonuclease.
  
 
 0.604
ZPR_4008
Putative transcriptional regulator.
 
    0.566
ZPR_1768
LexA DNA-binding protein.
 
    0.565
ZPR_3431
Restriction endonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.556
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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