STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0891Secreted protein. (197 aa)    
Predicted Functional Partners:
ZPR_2359
Membrane protein.
  
     0.614
ZPR_2699
Conserved hypothetical protein.
  
     0.589
ZPR_0892
Transketolase, C-terminal subunit.
       0.577
ZPR_0055
Membrane protein.
  
     0.542
ZPR_2133
Uncharacterized conserved protein.
  
     0.510
ZPR_0893
Transketolase N terminal section.
       0.488
ZPR_2085
Secreted protein.
  
     0.461
ZPR_0942
Hyalin domain-containing protein.
  
    0.458
ZPR_0866
Secreted outer membrane protein (OmpH-like).
  
 
 
 0.456
ZPR_2424
Membrane protein.
  
     0.446
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.