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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0909Conserved hypothetical protein. (439 aa)    
Predicted Functional Partners:
ZPR_0908
Conserved hypothetical protein.
 
     0.830
ZPR_0917
Endo-1,4-beta-xylanase D precursor; Belongs to the glycosyl hydrolase 43 family.
 
     0.771
ZPR_0916
Conserved hypothetical protein.
 
     0.744
ZPR_0915
Putative beta-xylosidase.
 
     0.719
ZPR_0910
Glycosyl Hydrolase.
       0.717
ZPR_0914
Beta-glucanase precursor; Belongs to the glycosyl hydrolase 43 family.
 
     0.699
ZPR_0907
tonB-dependent Receptor Plug domain protein.
 
     0.668
ZPR_0913
Conserved hypothetical protein.
 
     0.666
ZPR_0911
Beta-galactosidase.
 
    0.665
ZPR_4647
Alpha-glucosidase.
 
     0.596
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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