Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ZPR_0913Conserved hypothetical protein. (409 aa)    
Predicted Functional Partners:
ZPR_0910
Glycosyl Hydrolase.
     0.909
ZPR_0912
Beta-glucanase precursor.
     0.829
ZPR_0909
Conserved hypothetical protein.
 
     0.699
ZPR_0914
Beta-glucanase precursor; Belongs to the glycosyl hydrolase 43 family.
 
     0.672
ZPR_0916
Conserved hypothetical protein.
 
     0.630
ZPR_4223
Putative outer membrane protein probably involved in nutrient binding.
  
     0.605
ZPR_0917
Endo-1,4-beta-xylanase D precursor; Belongs to the glycosyl hydrolase 43 family.
 
     0.603
ZPR_0915
Putative beta-xylosidase.
 
     0.565
ZPR_4224
tonB-dependent Receptor Plug domain protein.
  
     0.564
ZPR_0904
tonB-dependent Receptor Plug domain protein.
 
     0.507
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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