Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ZPR_0940linoleoyl-CoA desaturase. (368 aa)    
Predicted Functional Partners:
ZPR_1492
Transmembrane family 2 fatty acid desaturase.
  
  
 
0.908
ZPR_0295
Phospholipase A1.
     
  0.900
ZPR_0939
Aspartate aminotransferase.
       0.728
ZPR_4145
Conserved hypothetical protein.
  
     0.656
rsmG
Glucose-inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
       0.573
ZPR_1207
Patatin-like phospholipase.
  
     0.488
ZPR_1913
tRNA hydroxylase.
  
     0.483
ZPR_3111
Membrane protein.
  
     0.448
ZPR_0654
Membrane protein.
  
     0.444
ZPR_1206
Patatin-like phospholipase.
  
     0.436
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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