STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0984ATP-dependent Clp protease adaptor protein; Belongs to the ClpS family. (89 aa)    
Predicted Functional Partners:
clpB
Chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.790
ZPR_2592
ClpA/ClpB family chaperone; Belongs to the ClpA/ClpB family.
  
 
 0.790
ZPR_0983
Ribosomal protein L11 methyltransferase.
 
     0.748
ZPR_1209
Conserved hypothetical protein.
 
     0.722
ZPR_1811
Ferritin-like DNA-binding protein; Belongs to the Dps family.
   
 
 0.707
ZPR_2252
Dps family ferritin-like DNA-binding protein; Belongs to the Dps family.
   
 
 0.707
ZPR_0326
Conserved hypothetical protein.
  
     0.687
ZPR_2136
acyl-CoA reductase.
  
 
   0.685
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.681
ZPR_1812
DNA-binding DPS protein.
   
 
 0.656
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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