Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ZPR_1008Beta-galactosidase. (1033 aa)    
Predicted Functional Partners:
ZPR_4314
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase.
 
 0.924
ZPR_4178
beta-N-acetylhexosaminidase.
  
 0.913
ZPR_4718
beta-N-acetylhexosaminidase.
  
 0.913
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
   
 
  0.902
ZPR_2494
ROK family protein.
     
 0.902
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.808
ZPR_4170
Putative exported beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
 
 0.757
ZPR_2491
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.754
ZPR_3502
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.749
ZPR_1010
Predicted protein.
    
 0.737
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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