Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1065Phosphate-selective porin O and P. (407 aa)    
Predicted Functional Partners:
ZPR_1066
Histone H1-like protein.
       0.628
ZPR_0492
Conserved hypothetical protein.
  
     0.543
ZPR_1398
Conserved hypothetical protein.
  
     0.487
ZPR_1064
Transcriptional regulator, AraC family protein.
       0.477
ZPR_1063
Hypothetical protein.
       0.474
ZPR_1601
TonB-dependent receptor.
  
     0.463
ZPR_4344
Multidrug resistance protein, FusA/NodT family protein.
  
     0.432
ZPR_0676
Permease.
  
     0.431
ZPR_4648
Endo-arabinase; Belongs to the glycosyl hydrolase 43 family.
  
     0.429
ZPR_2162
Membrane protein.
  
     0.422
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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