Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ZPR_0032 | ZPR_1139 | Protein containing methyltransferase domain. | Conserved hypothetical protein. | 0.420 |
ZPR_0091 | ZPR_0645 | Gliding motility lipoprotein gldH-like protein. | Conserved hypothetical protein. | 0.617 |
ZPR_0091 | ZPR_1139 | Gliding motility lipoprotein gldH-like protein. | Conserved hypothetical protein. | 0.419 |
ZPR_0091 | ZPR_3927 | Gliding motility lipoprotein gldH-like protein. | Gliding motility protein GldJ. | 0.820 |
ZPR_0091 | ZPR_4147 | Gliding motility lipoprotein gldH-like protein. | Gliding motility protein GldO. | 0.767 |
ZPR_0091 | ZPR_4209 | Gliding motility lipoprotein gldH-like protein. | Protein containing mevalonate and galactokinase signatures. | 0.610 |
ZPR_0091 | ZPR_4210 | Gliding motility lipoprotein gldH-like protein. | Diphosphomevalonate decarboxylase. | 0.425 |
ZPR_0645 | ZPR_0091 | Conserved hypothetical protein. | Gliding motility lipoprotein gldH-like protein. | 0.617 |
ZPR_0645 | ZPR_1139 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.551 |
ZPR_0645 | ZPR_3927 | Conserved hypothetical protein. | Gliding motility protein GldJ. | 0.471 |
ZPR_0645 | ZPR_4147 | Conserved hypothetical protein. | Gliding motility protein GldO. | 0.741 |
ZPR_0645 | ZPR_4209 | Conserved hypothetical protein. | Protein containing mevalonate and galactokinase signatures. | 0.794 |
ZPR_0645 | ZPR_4210 | Conserved hypothetical protein. | Diphosphomevalonate decarboxylase. | 0.937 |
ZPR_1137 | ZPR_1138 | Conserved hypothetical protein. | Methyltransferase. | 0.714 |
ZPR_1137 | ZPR_1139 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.526 |
ZPR_1138 | ZPR_1137 | Methyltransferase. | Conserved hypothetical protein. | 0.714 |
ZPR_1138 | ZPR_1139 | Methyltransferase. | Conserved hypothetical protein. | 0.645 |
ZPR_1139 | ZPR_0032 | Conserved hypothetical protein. | Protein containing methyltransferase domain. | 0.420 |
ZPR_1139 | ZPR_0091 | Conserved hypothetical protein. | Gliding motility lipoprotein gldH-like protein. | 0.419 |
ZPR_1139 | ZPR_0645 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.551 |
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