STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1268Conserved protein found in conjugate transposon. (172 aa)    
Predicted Functional Partners:
ZPR_1267
Conserved hypothetical protein.
       0.693
ZPR_1266
Conserved protein found in conjugate transposon.
  
    0.615
ZPR_1265
Conjugative transposon protein TraM.
       0.562
ZPR_1264
Conserved protein found in conjugate transposon.
       0.554
ZPR_1269
Type IV secretory pathway, VirB4 component.
       0.547
ZPR_1270
Membrane protein.
       0.547
ZPR_1271
Conserved hypothetical protein.
       0.475
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.