STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1310Transposase. (174 aa)    
Predicted Functional Partners:
ZPR_3272
Tyrosine type site-specific recombinase; Belongs to the 'phage' integrase family.
     0.547
ZPR_1311
Transposase, IS21 family protein.
       0.530
ZPR_1290
Tyrosine type site-specific recombinase; Belongs to the 'phage' integrase family.
     0.521
ZPR_1312
Probable insertion sequence ATP-binding protein, IS21 family.
       0.483
ZPR_3312
Reverse transcriptase.
  
     0.469
ZPR_3982
RNA-directed DNA polymerase (Reverse transcriptase).
  
     0.456
ZPR_1303
Reverse transcriptase.
  
     0.446
ZPR_2293
Two-component system sensor histidine kinase/response regulator hybrid.
   
 
 0.442
ZPR_3938
Glutamate synthase (NADPH) large subunit.
  
  
 0.422
ZPR_3983
Transposase.
  
     0.412
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.