STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1468Short-chain dehydrogenase/reductase SDR. (293 aa)    
Predicted Functional Partners:
ZPR_1469
methylmalonyl-CoA mutase.
  
  
 0.572
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.540
ZPR_1470
methylmalonyl-CoA mutase small subunit.
     
 0.532
ZPR_1465
Conserved hypothetical protein.
       0.526
ZPR_1466
ParB-like chromosome partition protein; Belongs to the ParB family.
       0.526
ZPR_1467
ParA-like ATPase.
       0.526
ZPR_3677
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.500
ZPR_3768
O-methyltransferase protein.
 
  
   0.488
ZPR_0625
OMPP1/FadL/TodX family outer membrane protein transport protein.
  
     0.449
ZPR_1472
Uridine kinase.
  
   0.447
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.