Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ZPR_0279 | ZPR_1756 | ZPR_0279 | ZPR_1756 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Zinc-type alcohol dehydrogenase. | 0.904 |
ZPR_0279 | ZPR_3677 | ZPR_0279 | ZPR_3677 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
ZPR_0279 | kbl | ZPR_0279 | ZPR_0271 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.468 |
ZPR_1756 | ZPR_0279 | ZPR_1756 | ZPR_0279 | Zinc-type alcohol dehydrogenase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.904 |
ZPR_1756 | ZPR_2040 | ZPR_1756 | ZPR_2040 | Zinc-type alcohol dehydrogenase. | Pirin family protein; Belongs to the pirin family. | 0.550 |
ZPR_1756 | ZPR_2344 | ZPR_1756 | ZPR_2344 | Zinc-type alcohol dehydrogenase. | Aminocarboxylic acid CoA-ligase. | 0.412 |
ZPR_1756 | ZPR_2469 | ZPR_1756 | ZPR_2469 | Zinc-type alcohol dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.451 |
ZPR_1756 | ZPR_2629 | ZPR_1756 | ZPR_2629 | Zinc-type alcohol dehydrogenase. | Flavoprotein NADH-dependent oxidoreductase. | 0.568 |
ZPR_1756 | ZPR_3677 | ZPR_1756 | ZPR_3677 | Zinc-type alcohol dehydrogenase. | Malonyl CoA-acyl carrier protein transacylase. | 0.912 |
ZPR_1756 | kbl | ZPR_1756 | ZPR_0271 | Zinc-type alcohol dehydrogenase. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.451 |
ZPR_2040 | ZPR_1756 | ZPR_2040 | ZPR_1756 | Pirin family protein; Belongs to the pirin family. | Zinc-type alcohol dehydrogenase. | 0.550 |
ZPR_2344 | ZPR_1756 | ZPR_2344 | ZPR_1756 | Aminocarboxylic acid CoA-ligase. | Zinc-type alcohol dehydrogenase. | 0.412 |
ZPR_2344 | ZPR_3677 | ZPR_2344 | ZPR_3677 | Aminocarboxylic acid CoA-ligase. | Malonyl CoA-acyl carrier protein transacylase. | 0.794 |
ZPR_2344 | kbl | ZPR_2344 | ZPR_0271 | Aminocarboxylic acid CoA-ligase. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.921 |
ZPR_2469 | ZPR_1756 | ZPR_2469 | ZPR_1756 | 3-hydroxyacyl-CoA dehydrogenase. | Zinc-type alcohol dehydrogenase. | 0.451 |
ZPR_2469 | ZPR_2629 | ZPR_2469 | ZPR_2629 | 3-hydroxyacyl-CoA dehydrogenase. | Flavoprotein NADH-dependent oxidoreductase. | 0.514 |
ZPR_2469 | ZPR_3677 | ZPR_2469 | ZPR_3677 | 3-hydroxyacyl-CoA dehydrogenase. | Malonyl CoA-acyl carrier protein transacylase. | 0.590 |
ZPR_2629 | ZPR_1756 | ZPR_2629 | ZPR_1756 | Flavoprotein NADH-dependent oxidoreductase. | Zinc-type alcohol dehydrogenase. | 0.568 |
ZPR_2629 | ZPR_2469 | ZPR_2629 | ZPR_2469 | Flavoprotein NADH-dependent oxidoreductase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.514 |
ZPR_3677 | ZPR_0279 | ZPR_3677 | ZPR_0279 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.999 |
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