STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1788Response regulator. (309 aa)    
Predicted Functional Partners:
ZPR_1789
Asparaginase.
 
    0.930
ZPR_1787
Putative regulatory protein RteC-like protein.
 
     0.860
ZPR_1785
Conserved hypothetical protein.
 
     0.773
ZPR_2293
Two-component system sensor histidine kinase/response regulator hybrid.
  
 
 0.765
ZPR_4109
Adenylate cyclase-related protein.
  
   0.687
ZPR_1767
Conserved hypothetical protein.
  
     0.673
ZPR_3198
Sugar-binding sensor histidine kinase/response regulator hybrid.
 
 
 0.643
ZPR_4477
Protein containing tetratricopeptide repeat.
  
 
 0.611
ZPR_4101
Conserved hypothetical protein.
  
     0.598
ZPR_1770
Conserved protein found in conjugate transposon TraN.
  
    0.595
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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