STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1812DNA-binding DPS protein. (43 aa)    
Predicted Functional Partners:
ZPR_1811
Ferritin-like DNA-binding protein; Belongs to the Dps family.
 
     0.936
ZPR_1810
Rhodanese-like protein.
       0.781
ZPR_0984
ATP-dependent Clp protease adaptor protein; Belongs to the ClpS family.
   
 
 0.656
ZPR_2354
Trp repressor binding protein; Belongs to the WrbA family.
  
  
 0.567
ZPR_1809
Conserved hypothetical protein.
       0.550
ZPR_1155
Sigma-54 modulation protein-like ribosome-associated protein.
  
    0.486
ZPR_2252
Dps family ferritin-like DNA-binding protein; Belongs to the Dps family.
  
     0.486
ZPR_2690
Sigma-54 modulation protein-like ribosome-associated protein.
  
    0.486
ZPR_0374
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.474
ZPR_1808
Sulphide quinone reductase.
     
 0.466
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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