STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1817Thioredoxin, putative. (208 aa)    
Predicted Functional Partners:
ZPR_1818
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
 
 
   0.859
ZPR_1816
Thiol:disulfide interchange protein DsbD precursor.
 
 
 0.767
ZPR_1815
Thiol:disulfide interchange protein DsbD precursor.
 
 
 0.746
ZPR_1819
Conserved hypothetical protein.
       0.693
ZPR_3257
Redoxin domain-containing protein.
 
     0.638
ZPR_1401
Cytochrome c oxidase, subunit II.
   
 
 0.623
ZPR_0846
cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase.
    
 
 0.617
ZPR_1686
cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase.
    
 
 0.617
ZPR_1814
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
 
 
   0.541
ZPR_1337
Thioredoxin family protein.
 
     0.497
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.