Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1900OsmC family protein. (138 aa)    
Predicted Functional Partners:
ZPR_1901
MarR family transcriptional regulator.
  
 0.898
ZPR_2459
Trehalose 6-phosphate synthase.
   
    0.669
ZPR_0374
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.644
ZPR_0772
Transcriptional regulator, BlaI/MecI/CopY family, putative.
  
 0.539
ZPR_1899
Transglycosylase.
       0.532
ZPR_1811
Ferritin-like DNA-binding protein; Belongs to the Dps family.
  
  
 0.481
ZPR_2252
Dps family ferritin-like DNA-binding protein; Belongs to the Dps family.
  
  
 0.481
ZPR_3085
csbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.451
ZPR_1017
Two-component system sensor histidine kinase.
   
    0.414
ZPR_1742
Conserved hypothetical protein.
   
    0.414
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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