STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1984Membrane protein, putative. (271 aa)    
Predicted Functional Partners:
ZPR_3019
Metallo-beta-lactamase superfamily protein.
  
 0.677
ZPR_1983
CRP family transcriptional regulator.
 
     0.675
ZPR_1794
Metallo-beta-lactamase superfamily protein.
  
 0.627
ZPR_1810
Rhodanese-like protein.
  
 0.516
ZPR_1996
Metallo-beta-lactamase/rhodanese-like domain-containing protein.
  
 0.489
ZPR_1985
Cytochrome bd ubiquinol oxidase subunit I.
       0.459
ZPR_1986
Cytochrome bd ubiquinol oxidase subunit II.
       0.442
ZPR_3597
Periplasmic trypsin-like serine protease.
    
 
 0.432
ZPR_1982
Metal-dependent phosphohydrolase.
       0.409
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.