STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1985Cytochrome bd ubiquinol oxidase subunit I. (433 aa)    
Predicted Functional Partners:
ZPR_1986
Cytochrome bd ubiquinol oxidase subunit II.
 0.999
ZPR_2301
Probable cytochrome oxidase subunit (cbb3-type); Belongs to the heme-copper respiratory oxidase family.
    
 0.636
ZPR_1384
Aldehyde dehydrogenase.
   
  
 0.597
ZPR_3649
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.597
ZPR_4362
Alcohol dehydrogenase.
   
  
 0.584
ZPR_2957
Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase.
      
 0.576
ZPR_0232
Succinate dehydrogenase.
     
 0.570
ZPR_1360
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
     
 0.570
panD
Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
   
  
 0.547
ZPR_1743
Proline dehydrogenase.
   
 
 0.544
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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