STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1994Twin-arginine translocation pathway signal. (330 aa)    
Predicted Functional Partners:
ZPR_4361
Amidohydrolase.
 
 0.975
ZPR_0143
PfkB family carbohydrate kinase.
    
 0.807
ZPR_3192
PfkB family carbohydrate kinase.
    
 0.807
ZPR_4366
Mandelate racemase/muconate lactonizing protein.
 
   
 0.520
ZPR_2126
Aldo/keto reductase family protein.
  
     0.514
ZPR_1995
Sterol desaturase family protein.
       0.486
ZPR_4577
Histone deacetylase family protein.
   
  0.461
ZPR_1996
Metallo-beta-lactamase/rhodanese-like domain-containing protein.
  
  
 0.450
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.