STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_1995Sterol desaturase family protein. (289 aa)    
Predicted Functional Partners:
ZPR_4202
Mannosyltransferase.
  
 
   0.782
ZPR_4197
Iron-sulfur binding transmembrane protein.
  
     0.750
ZPR_4195
Nitrite reductase (NAD(P)H) large subunit.
  
     0.723
ZPR_4199
RfbJ-like lipopolysaccharide biosynthesis glycosyl transferase.
 
 
   0.722
ZPR_1996
Metallo-beta-lactamase/rhodanese-like domain-containing protein.
       0.681
ZPR_0875
Phytoene synthase.
  
 
 0.650
ZPR_4194
Conserved hypothetical protein.
  
    0.650
ZPR_4193
Secreted protein containing DUF547.
 
     0.623
ZPR_4189
Radical SAM superfamily protein.
 
     0.608
ZPR_4190
Conserved hypothetical protein.
 
     0.601
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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