STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2020FKBP-type peptidyl-prolyl cis-trans isomerase. (153 aa)    
Predicted Functional Partners:
ZPR_1191
Heat shock protein 90.
  
 0.711
ZPR_0590
Conserved hypothetical protein.
    
   0.665
ZPR_0947
Conserved hypothetical protein.
    
 
 0.627
ZPR_3926
Conserved hypothetical protein.
    
 
 0.627
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
   0.596
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.571
ZPR_2453
Protein containing PRC-barrel domain.
    
 
 0.514
ZPR_0846
cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase.
 
0.458
ZPR_2571
FKBP-type peptidyl-prolyl cis-trans isomerase.
 
   
 0.448
ZPR_2019
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
   
   0.443
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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