Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ZPR_2091Putative prophage LambdaCh01, repressor protein. (251 aa)    
Predicted Functional Partners:
ZPR_2092
Conserved hypothetical protein.
 
     0.885
ZPR_2093
pspA/IM30 family protein.
 
    0.880
ZPR_2094
Membrane protein.
 
     0.852
ZPR_2095
SPFH domain / Band 7 family protein.
 
     0.827
ZPR_2096
ATPase.
 
    0.802
ZPR_2090
Conserved hypothetical protein.
       0.651
ZPR_2283
Heme oxygenase.
  
     0.644
ZPR_4600
Membrane protein.
  
     0.594
ZPR_2613
Membrane protein.
  
     0.441
ZPR_1054
Conserved hypothetical protein.
  
     0.410
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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