STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2136acyl-CoA reductase. (355 aa)    
Predicted Functional Partners:
ZPR_0495
Acyl-protein synthetase, LuxE.
 
 
 0.820
ZPR_0326
Conserved hypothetical protein.
  
     0.754
ZPR_0853
Conserved hypothetical protein.
  
     0.724
ZPR_0488
uroporphyrinogen-III synthase.
  
     0.718
ZPR_2137
Ferredoxin-like protein.
 
  
 0.710
ZPR_0207
Conserved hypothetical protein.
  
     0.705
ZPR_3821
Gliding motility protein GldC.
  
     0.695
ZPR_0041
Conserved hypothetical protein.
 
 
 0.686
rpmF
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
 
  0.683
ZPR_0984
ATP-dependent Clp protease adaptor protein; Belongs to the ClpS family.
  
 
   0.673
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.