STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2147L-ribulose-5-phosphate 4-epimerase. (234 aa)    
Predicted Functional Partners:
ZPR_2146
Ribulokinase.
 
 
 0.997
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 0.986
ZPR_2996
Xylulose kinase.
  
 
 0.949
ZPR_0923
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.920
ZPR_2150
Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.740
ZPR_2149
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 0.732
ZPR_2141
alpha-L-arabinofuranosidase.
 
  
 0.692
ZPR_2145
alpha-L-arabinofuranosidase A precursor.
 
  
 0.619
ZPR_2142
Putative glycosyl hydrolase.
 
     0.604
ZPR_2144
Glycosyl hydrolases family 43.
 
  
 0.587
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
Server load: low (20%) [HD]