STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2154Putative outer membrane protein, probably involved in nutrient binding. (487 aa)    
Predicted Functional Partners:
ZPR_2153
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.872
ZPR_2155
Putative ATP/GTP-binding protein.
 
     0.798
atpE
ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.790
ZPR_4224
tonB-dependent Receptor Plug domain protein.
 
     0.748
ZPR_4651
ragB/SusD family protein.
  
     0.598
ZPR_4652
tonB-dependent Receptor Plug domain protein.
 
     0.562
ZPR_1381
tonB dependent receptor.
  
     0.553
ZPR_1802
Putative outer membrane protein.
  
     0.546
ZPR_2936
tonB-dependent Receptor Plug domain protein.
  
     0.546
ZPR_2229
Putative outer membrane protein.
  
     0.537
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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