STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2157Conserved hypothetical protein. (221 aa)    
Predicted Functional Partners:
ZPR_2155
Putative ATP/GTP-binding protein.
     0.840
ZPR_2158
Six-hairpin glycosidase-like protein.
       0.773
ZPR_3167
Protein containing F5/8 type C domain.
     0.732
ZPR_2156
Putative alpha-1,2-mannosidase.
      0.714
ZPR_3169
ragB/SusD family protein.
  
     0.678
ZPR_1557
Protein containing F5/8 type C domain.
  
     0.671
ZPR_4335
Glutaminase.
  
     0.661
ZPR_3166
Protein containing F5/8 type C domain.
     0.656
ZPR_3170
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.636
ZPR_1624
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.603
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.