Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ZPR_2292Formate/nitrite transporter. (294 aa)    
Predicted Functional Partners:
ZPR_2291
6-phosphogluconate dehydrogenase.
       0.750
ZPR_4195
Nitrite reductase (NAD(P)H) large subunit.
  
  
 0.713
ZPR_0323
Carbonic anhydrase.
  
    0.712
ZPR_3631
Ferredoxin-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.693
ZPR_0676
Permease.
  
    0.614
ZPR_3217
P-loop containing nucleoside triphosphate hydrolase.
  
     0.502
ZPR_2290
CDF family cation efflux protein.
       0.489
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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