Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2295Response regulator receiver domain-containing protein. (118 aa)    
Predicted Functional Partners:
ZPR_2293
Two-component system sensor histidine kinase/response regulator hybrid.
 
 
 0.981
ZPR_2477
Histidine kinase sensor protein.
 
 
 0.853
ZPR_0864
Histidine kinase.
 
 
 0.842
ZPR_0500
Two-component system sensor histidine kinase.
 
 
 0.841
ZPR_2014
Sensory transduction histidine kinase.
 
 
 0.825
ZPR_2296
Conserved hypothetical protein.
 
     0.819
ZPR_1367
Osmosensitive K+ channel signal transduction histidine kinase.
 
 
 0.816
ZPR_3364
Sensor histidine kinase.
 
 
 0.815
ZPR_3238
Two-component system sensor histidine kinase.
 
 
 0.807
ZPR_2294
Protein containing hpt domain.
  
 
 0.799
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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