STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2297Transmembrane family-2 glycosyl transferase. (475 aa)    
Predicted Functional Partners:
ZPR_1256
Phosphoglycerol transferase.
     0.971
ZPR_2296
Conserved hypothetical protein.
 
     0.951
ZPR_2766
Polysaccharide deacetylase domain-containing protein.
  
 0.921
ZPR_1258
TPR repeat-containing protein.
 
    0.790
ZPR_2295
Response regulator receiver domain-containing protein.
 
    0.766
ZPR_2293
Two-component system sensor histidine kinase/response regulator hybrid.
 
  
 0.755
ZPR_0522
Polysaccharide deacetylase domain-containing protein.
  
 0.750
ZPR_1257
Conserved hypothetical protein.
 
     0.713
ZPR_2294
Protein containing hpt domain.
  
  
 0.618
ZPR_4313
Creatinine amidohydrolase.
  
  
 0.506
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.