STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2385Transposase. (118 aa)    
Predicted Functional Partners:
ZPR_2386
Integrase, catalytic region.
       0.645
ZPR_2384
Hypothetical protein.
       0.517
ZPR_2382
Hypothetical protein.
      
0.504
ZPR_2383
Hypothetical protein.
      
0.504
hisD
Putative histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.499
ZPR_3897
OmpA/MotB family outer membrane protein.
  
 
 0.464
ZPR_4648
Endo-arabinase; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.464
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
   0.417
ZPR_2914
LysM domain-containing protein.
  
 
 0.415
ZPR_0796
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase family protein.
   
 
 0.413
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.