STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_24693-hydroxyacyl-CoA dehydrogenase. (786 aa)    
Predicted Functional Partners:
ZPR_2468
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
ZPR_2596
acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
ZPR_2467
acyl-CoA dehydrogenase.
 
 0.995
ZPR_3937
acyl-CoA dehydrogenase.
 
 0.983
ZPR_0511
acyl-CoA dehydrogenase.
 
 0.981
ZPR_3639
acyl-CoA dehydrogenase.
 
 0.980
ZPR_1152
acyl-CoA dehydrogenase.
  
 0.977
ZPR_0095
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
  
 0.960
ZPR_0093
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.
  
 
 0.954
ZPR_0120
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.950
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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