STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2470MarR family transcriptional regulator. (150 aa)    
Predicted Functional Partners:
ZPR_2469
3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.772
ZPR_2758
S-adenosyl-L-methionine-dependent methyltransferase.
  
     0.660
ZPR_0269
Conserved hypothetical protein.
  
     0.598
ZPR_2468
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.567
ZPR_0272
UvrD/REP family helicase.
  
    0.555
ZPR_2467
acyl-CoA dehydrogenase.
 
  
 0.539
ZPR_2402
PspC domain-containing protein.
 
   
 0.489
ZPR_2471
long-chain-fatty-acid--CoA ligase.
       0.487
ZPR_0811
Conserved hypothetical protein.
  
     0.485
ZPR_3061
O-succinylbenzoyl-CoA synthetase.
  
   
 0.451
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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