STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2496RecName: Full=L-glutamine:2-deoxy-scyllo-inosose aminotransferase; Short=L-glutamine:DOI aminotransferase emb|CAE22472.1| putative 2-deoxy-scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (445 aa)    
Predicted Functional Partners:
ZPR_2495
Oxidoreductase family, NAD-binding Rossmann fold protein.
  
 0.931
ZPR_2260
Capsular polysaccharide biosynthesis protein CapD.
  
 0.892
ZPR_1126
Sugar transferase.
  
  
 0.875
ZPR_2497
Glycoside hydrolase family protein.
 
     0.845
ZPR_2500
SSS sodium solute transporter superfamily protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.792
ZPR_2498
Hypothetical protein.
       0.773
ZPR_2499
Hypothetical protein.
       0.727
ZPR_2099
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.676
ZPR_2494
ROK family protein.
       0.655
ZPR_3229
GFO/IDH/MocA family oxidoreductase.
 
  
 0.630
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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