STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2500SSS sodium solute transporter superfamily protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (502 aa)    
Predicted Functional Partners:
ZPR_2497
Glycoside hydrolase family protein.
 
     0.889
ZPR_2496
RecName: Full=L-glutamine:2-deoxy-scyllo-inosose aminotransferase; Short=L-glutamine:DOI aminotransferase emb|CAE22472.1| putative 2-deoxy-scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.792
ZPR_2499
Hypothetical protein.
       0.773
ZPR_2495
Oxidoreductase family, NAD-binding Rossmann fold protein.
 
     0.739
ZPR_2498
Hypothetical protein.
       0.727
ZPR_2494
ROK family protein.
 
     0.682
ZPR_2503
Conserved hypothetical protein.
  
     0.530
ZPR_2501
Hypothetical protein.
       0.499
ZPR_2506
Conserved hypothetical protein.
  
     0.498
ZPR_2502
Outer membrane protein.
  
     0.458
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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